本文详细介绍了新一代用于聚焦离子束的图形产生和自动套准系统。该系统设计的基点是充分考虑计算机运算速度极大的提高，使得原来必须靠硬件实现的功能，完全可以由软件来实现，而并不降低其执行速度。带来的好处是大大降低了硬件的规模，提高了系统的可靠性、灵活性和可扩展性。由于硬件的规模的降低，成本也相应降低，这就有利于系统的推广应用。 This article details a new generation of graph generation and automatic registration systems for focused ion beams. The basic point of the system design is to fully consider the computer operation speed greatly improved, making the original hardware must be realized by the function, can be achieved by software, without reducing its execution speed. The benefits are greatly reduced hardware size and increased system reliability, flexibility and scalability. As the size of the hardware is reduced, the cost is correspondingly reduced, which is beneficial to the popularization and application of the system.