Based on the CHAMP Magsat data set, spherical cap harmonic analysis was used to model the magnetic fields over China continent. The data set used in the analysis includes the 15′×15′ gridded values of the CHAMP anomaly fields (latitude φ=25°N to 50°N and longitude λ=78°E to 135°E). The pole of the cap is located at φ=35°N and λ=110°E with half-angle of 30°. The maximum index (Kmax) of the model is 30 and the total number of model coefficients is 961, which corresponds to the minimum wavelength at the earth's surface about 400 km. The root mean square (RMS) deviations between the calculated and observed values are ～ 4 nT for ΔX, ～ 3 nT for ΔY and ～ 3.5 nT for ΔZ, respectively. Results show that positive anomalies are found mainly at the Tarim basin with ～6- 8 nT, the Yangtze platform and North China platform with ～4 nT, and the Songliao basin with ～4-6 nT. In contrast, negative anomaly is mainly located in the Tibet orogenic belt with the amplitude ～ (-6)-(-8) nT. Upward continuation of magnetic anomalies was used to semi-quantitatively separate the magnetic anomalies in different depths of crust. The magnetic anomalies at the earth's surface are from -6 to 10 nT for upper crust, middle crust -27 to 42 nT and lower crust -12 to 18 nT, respectively. The strikes of the magnetic anomalies for the upper crust are consistent with those for the middle crust, but not for the lower crust. The high positive magnetic anomalies mainly result from the old continental nucleus and diastrophic block (e.g. middle Sichuan continental nucleus, middle Tarim basin continental nucleus, Junggar diastrophic block and Qaidam diastrophic block). The amplitudes of the magnetic anomalies of the old continental nucleus and diastrophic block are related to evolution of deep crust. These results improve our understanding of the crustal structure over China continent.