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This paper reports a geomorphologic landscape investigation, vegetation survey and soil sampling at 14 sites across the Gurbantunggut Desert between 87°37′09“-88°24′04”E and 44°14′04"-45°41′52′Nl. The study encountered 8 species of low trees and shrubs, 5 of perennial herbs, 8of annual plants and 48 of ephemeral and ephemeroid plants. These species of plants represent one-third of the species found in the Gurbantunggut Desert, and their communities make up a large proportion of desert vegetation with great landscape significance. In the investigation we found that the plant communities are accordingly succeeded with the spatial variation of macro-ecoenvironment.Using Principal Component Analysis (PCA) and Correlation Analysis (CA) we found that the micro-ecoenvironment heterogeneity of aeolian sandy soil′s physical and chemical properties such as soil nutrient, soil moisture, soil salt, pH etc. only impacted the diversity of herb synusia (PIEherb) of the desert, with a negative correlation. Meanwhile, the impact of microhabitat on the plant community pattern with an antagonistic interaction made vegetation′s eco-distribution in a temporary equilibrium.