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目的:测定陕西地区丙型肝炎病毒的C区基因序列,为进一步研究HCV的流行病学和开展HCV的诊治打下基础.方法:自行设计合成了两条正向引物和两条反向引物,用反转录PCR(RTPCR)法从陕西地区1例NANB型肝炎患者血清中扩增出436bp的片段,将此片段克隆于PGEM7Zf(+)中用全自动序列分析仪测序.结果:测得436bp的核苷酸序列,将所得核苷酸序列及由它们所编码的相应氨基酸序列与HCVJ6,HCVJ8,HCVHebei,HCVHunan,HCV1比较,显示所分离HCV在核苷酸水平上与以上分离株的同源性分别为957%,872%,839%,839%和827%;在氨基酸水平上的同源性分别为977%,947%,908%,901%和901%.结论:所分离株与HCVJ6同属2a型
Objective: To determine the C region gene sequence of hepatitis C virus in Shaanxi province and lay the foundation for further study of HCV epidemiology and diagnosis and treatment of HCV. Methods: Two forward primers and two reverse primers were designed and synthesized. A 436 bp fragment was amplified from the serum of a patient with NANB hepatitis in Shaanxi Province by reverse transcription PCR (RTPCR) Clone in PGEM 7Zf (+) with automatic sequence analysis of sequencing. Results: The nucleotide sequence of 436bp was measured, and the nucleotide sequences obtained and the corresponding amino acid sequences encoded by them were compared with HCV-J6, HCV-J8, HCV-Hebei, HCV-Hunan and HCV- Isolation of HCV at the nucleotide level with the above isolates were 95.7%, 872%, 839%, 839% and 827%, respectively. At the amino acid level, homology The results were 977%, 947%, 908%, 901% and 901% respectively. Conclusion: The isolated strains and HCV J6 belong to 2a type